Hi everyone,
I ran a structural PLS analysis and I would like to export the results so I can run cluster correction and make figures via AFNI. However when I save the bootsrap ratio for LV 1 through the GUI it does not overlay with the anatomicals correctly. Am I incorrectly exporting the BSR results? I have included a link two images, one with exported results in the afni view and the second results in the PLS gui:
Hi everyone,
I ran a structural PLS analysis and I would like to export the results so I can run cluster correction and make figures via AFNI. However when I save the bootsrap ratio for LV 1 through the GUI it does not overlay with the anatomicals correctly. Am I incorrectly exporting the BSR results? I have included a link two images, one with exported results in the afni view and the second results in the PLS gui:
can you try overlaying on the same image you used in PLS?
can you try overlaying on the same image you used in PLS?
Hi Randy,
Turns out you are correct when I use the img hdr version of the underlay and the bootstrap export from PLS it aligns correctly in the AFNI viewer. When I use the brik+head or nifti versions of the same files I get this weird alignment. Seems like I am making a mistake somwehere converting between file types but the PLS export is working correctly.
Thanks for quick response.
Baycrest is an academic health sciences centre fully affiliated with the University of Toronto
Privacy Statement - Disclaimer - © 1989-2025 BAYCREST HEALTH SCIENCE. ALL RIGHTS RESERVED